Nucleus recognition and FOCI counting

Nucleus regognition and relative position within the gonad using machine learning. Number of FOCI / Nucleus

This code implements the use of Machine Learning to find the position of each Nucleus in the image. It will give the relative position of the nucleus within the full gonad and count the number of FOCI per nucleus.

Project supporting	Link
Chloé Girard Anne Villeneuve's lab	Source code: https://github.com/bioimage-analysis/Chloe_Chromosome_detection Example notebook: https://nbviewer.jupyter.org/github/bioimage-analysis/Chloe_Chromosome_detection/blob/master/notebook/Training_classifier_Chloe.ipynb

Project supporting

Link

Chloé Girard

Anne Villeneuve's lab

Source code: https://github.com/bioimage-analysis/Chloe_Chromosome_detection
Example notebook: https://nbviewer.jupyter.org/github/bioimage-analysis/Chloe_Chromosome_detection/blob/master/notebook/Training_classifier_Chloe.ipynb